Files in GabrielHoffman/dreamlet
Scalable differential expression analysis of single cell transcriptomics datasets with complex study designs
.Rbuildignore
.github/.gitignore
.github/workflows/pkgdown.yaml
DESCRIPTION
NAMESPACE
NEWS.md
R/RcppExports.R
R/aggregateNonCountSignal.R
R/aggregateToPseudoBulk.R
R/aggregateVar.R
R/buildClusterTreeFromPB.R
R/cellCounts.R
R/cellTypeSpecificity.R
R/colsum2.R
R/colsum_fast.R
R/compositePosteriorTest.R
R/computeLogCPM.R
R/da_to_sparseMatrix.R
R/diffVar.R
R/dreamlet.R
R/dreamletCompareClusters.R
R/dreamletProcessedData.R
R/dropRedundantTerms.R
R/fitVarPart.R
R/mash.R
R/meta_analysis.R
R/misc.R
R/outlier.R
R/plotBeeswarm.R
R/plotCellComposition.R
R/plotForest.R
R/plotGeneHeatmap.R
R/plotHeatmap.R
R/plotPCA.R
R/plotPercentBars.R
R/plotProjection.R
R/plotVarPart.R
R/plotViolin.R
R/plotVolcano.R
R/plotVoom.R
R/processAssays.R
R/removeConstantTerms.R
R/stackAssays.R
R/vpDF.R
R/zenith_gsa.R
README.md
TODO
_pkgdown.yml
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