get_rep-mima: Get the representative community members.

In Guan06/mina: Microbial community dIversity and Network Analysis

Description

Get the representative community members.

Usage

## S4 method for signature 'mina'
get_rep(x, top = 5)

Arguments

x	An object of the class 'mina' with @norm define.
top	The percent of the most abundant and prevalent members.

Value

The same object with @norm replaced by the representative members.

Examples

maize <- new("mina", tab = maize_asv, des = maize_des)
maize <- norm_tab(maize, method = "raref")
maize <- get_rep(maize, top = 5)

Guan06/mina documentation built on Feb. 21, 2022, 11:56 a.m.