loadMeta: Load a count dataset associated with a study.
In HCBravoLab/metagenomeSeq: Statistical analysis for sparse high-throughput sequencing
loadMeta R Documentation
Load a count dataset associated with a study.
Description
Load a matrix of OTUs in a tab delimited format
Usage
loadMeta(file, sep = "\t")
Arguments
file
Path and filename of the actual data file.
sep
File delimiter.
Value
A list with objects 'counts' and 'taxa'.
See Also
loadPhenoData
Examples
dataDirectory <- system.file("extdata", package="metagenomeSeq")
lung = loadMeta(file.path(dataDirectory,"CHK_NAME.otus.count.csv"))
HCBravoLab/metagenomeSeq documentation built on Dec. 20, 2024, 4:06 p.m.
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| loadMeta | R Documentation |
Load a count dataset associated with a study.
Description
Load a matrix of OTUs in a tab delimited format
Usage
loadMeta(file, sep = "\t")
Arguments
file |
Path and filename of the actual data file. |
sep |
File delimiter. |
Value
A list with objects 'counts' and 'taxa'.
See Also
loadPhenoData
Examples
dataDirectory <- system.file("extdata", package="metagenomeSeq")
lung = loadMeta(file.path(dataDirectory,"CHK_NAME.otus.count.csv"))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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