Files in Honchkrow/SignacSlim
The slim version of signac
.gitignore
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
NEWS
R/FeatureMatrix.R
R/NucleosomeSignal.R
R/RcppExports.R
R/fragments.R
R/generics.R
R/genomeinfodb-methods.R
R/granges-methods.R
R/iranges-methods.R
R/objects.R
R/reexports.R
R/region-enrichment.R
R/utilities.R
R/visualization.R
README.md
inst/extdata/cell_name.txt
inst/extdata/fragments.tsv.gz
inst/extdata/fragments.tsv.gz.tbi
inst/extdata/peaks.rds
man/AggregateTiles.Rd
man/AlleleFreq.Rd
man/Annotation.Rd
man/ApplyMatrixByGroup.Rd
man/Assay-class.Rd
man/BinarizeCounts.Rd
man/Cells-set.Rd
man/Cells.Rd
man/ChromatinAssay-class.Rd
man/ChunkGRanges.Rd
man/CountFragments.Rd
man/CreateChromatinAssay.Rd
man/CreateFragmentObject.Rd
man/CreateRegionPileupMatrix.Rd
man/DimReduc-class.Rd
man/Extend.Rd
man/ExtractCell.Rd
man/ExtractFragments.Rd
man/FeatureMatrix.Rd
man/FilterCells.Rd
man/Fragment-class.Rd
man/FragmentHistogram.Rd
man/Fragments.Rd
man/GRangesToString.Rd
man/GetAssay.Rd
man/GetCellsInRegion.Rd
man/GetFragmentData.Rd
man/GetGRangesFromEnsDb.Rd
man/GetGroups.Rd
man/GetTSSPositions.Rd
man/Graph-class.Rd
man/JackStrawData-class.Rd
man/Links.Rd
man/Neighbor-class.Rd
man/NucleosomeSignal.Rd
man/Read10X_h5.Rd
man/RegionMatrix.Rd
man/RegionStats.Rd
man/SetIfNull.Rd
man/Seurat-class.Rd
man/SeuratCommand-class.Rd
man/SingleFeatureMatrix.Rd
man/SpatialImage-class.Rd
man/SplitFragments.Rd
man/StringToGRanges.Rd
man/TSSEnrichment.Rd
man/TSSPlot.Rd
man/UpdatePath.Rd
man/UpdateSlots.Rd
man/ValidateCells.Rd
man/ValidateFragments.Rd
man/ValidateHash.Rd
man/as.ChromatinAssay.Rd
man/coverage-ChromatinAssay-method.Rd
man/findOverlaps-methods.Rd
man/granges-methods.Rd
man/head.Fragment.Rd
man/inter-range-methods.Rd
man/isRemote.Rd
man/nearest-methods.Rd
man/reexports.Rd
man/seqinfo-methods.Rd
src/Makevars
src/Makevars.win
src/RcppExports.cpp
src/filter.cpp
src/group.cpp
src/group.h
src/split.cpp
src/validate.cpp
tests/testthat.R
tests/testthat/test-basicopr.R
vignettes/SignacSlim-Introduction.Rmd
