inter-range-methods: Inter-range transformations for ChromatinAssay objects

inter-range-methodsR Documentation

Inter-range transformations for ChromatinAssay objects

Description

The range, reduce, gaps, disjoin, isDisjoint, disjointBins methods are available for ChromatinAssay objects.

Usage

## S4 method for signature 'ChromatinAssay'
range(x, ..., with.revmap = FALSE, na.rm = FALSE)

## S4 method for signature 'ChromatinAssay'
reduce(x, drop.empty.ranges = FALSE, ...)

## S4 method for signature 'ChromatinAssay'
gaps(x, start = NA, end = NA)

## S4 method for signature 'ChromatinAssay'
disjoin(x, ...)

## S4 method for signature 'ChromatinAssay'
isDisjoint(x, ...)

## S4 method for signature 'ChromatinAssay'
disjointBins(x, ...)

Arguments

x

A ChromatinAssay object

...

Additional arguments

with.revmap

See inter-range-methods in the IRanges packages

na.rm

Ignored

drop.empty.ranges

See ?IRanges{inter-range-methods}

start, end

See ?IRanges{inter-range-methods}

Value

inter-range-methods

Functions

  • reduce,ChromatinAssay-method: method for ChromatinAssay objects

  • gaps,ChromatinAssay-method: method for ChromatinAssay objects

  • disjoin,ChromatinAssay-method: method for ChromatinAssay objects

  • isDisjoint,ChromatinAssay-method: method for ChromatinAssay objects

  • disjointBins,ChromatinAssay-method: method for ChromatinAssay objects

See Also

  • inter-range-methods in the IRanges package.

  • inter-range-methods in the GenomicRanges package

  • ChromatinAssay-class

Examples

print("see https://satijalab.org/signac/reference/chromatinassay-class")

Honchkrow/SignacSlim documentation built on April 9, 2022, 1:49 a.m.