inter-range-methods: Inter-range transformations for ChromatinAssay objects

In Honchkrow/SignacSlim: The slim version of signac

Inter-range transformations for ChromatinAssay objects

Description

The range, reduce, gaps, disjoin, isDisjoint, disjointBins methods are available for ChromatinAssay objects.

Usage

## S4 method for signature 'ChromatinAssay'
range(x, ..., with.revmap = FALSE, na.rm = FALSE)

## S4 method for signature 'ChromatinAssay'
reduce(x, drop.empty.ranges = FALSE, ...)

## S4 method for signature 'ChromatinAssay'
gaps(x, start = NA, end = NA)

## S4 method for signature 'ChromatinAssay'
disjoin(x, ...)

## S4 method for signature 'ChromatinAssay'
isDisjoint(x, ...)

## S4 method for signature 'ChromatinAssay'
disjointBins(x, ...)

Arguments

x	A ChromatinAssay object
...	Additional arguments
with.revmap	See inter-range-methods in the IRanges packages
na.rm	Ignored
drop.empty.ranges	See ?IRanges{inter-range-methods}
start, end	See ?IRanges{inter-range-methods}

Value

inter-range-methods

Functions

• reduce,ChromatinAssay-method: method for ChromatinAssay objects

• gaps,ChromatinAssay-method: method for ChromatinAssay objects

• disjoin,ChromatinAssay-method: method for ChromatinAssay objects

• isDisjoint,ChromatinAssay-method: method for ChromatinAssay objects

• disjointBins,ChromatinAssay-method: method for ChromatinAssay objects

See Also

• inter-range-methods in the IRanges package.

• inter-range-methods in the GenomicRanges package

• ChromatinAssay-class

Examples

print("see https://satijalab.org/signac/reference/chromatinassay-class")

Honchkrow/SignacSlim documentation built on April 9, 2022, 1:49 a.m.