ExtractFragments: Run groupCommand for the first n lines, convert the cell...
In Honchkrow/SignacSlim: The slim version of signac
ExtractFragments R Documentation
Run groupCommand for the first n lines, convert the cell barcodes in the file
to the cell names that appear in the fragment object, and subset the output to
cells present in the fragment object
Description
Every cell in the fragment file will be present in the output dataframe. If
the cell information is not set, every cell barcode that appears in the first
n lines will be present.
Usage
ExtractFragments(fragments, n = NULL, verbose = TRUE)
Arguments
fragments
A Fragment object
n
Number of lines to read from the beginning of the fragment file
verbose
Display messages
Value
Returns a data.frame
Honchkrow/SignacSlim documentation built on April 9, 2022, 1:49 a.m.
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| ExtractFragments | R Documentation |
Run groupCommand for the first n lines, convert the cell barcodes in the file to the cell names that appear in the fragment object, and subset the output to cells present in the fragment object
Description
Every cell in the fragment file will be present in the output dataframe. If the cell information is not set, every cell barcode that appears in the first n lines will be present.
Usage
ExtractFragments(fragments, n = NULL, verbose = TRUE)
Arguments
fragments |
A Fragment object |
n |
Number of lines to read from the beginning of the fragment file |
verbose |
Display messages |
Value
Returns a data.frame
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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