AggregateTiles: Quantify aggregated genome tiles

In Honchkrow/SignacSlim: The slim version of signac

Quantify aggregated genome tiles

Description

Quantifies fragment counts per cell in fixed-size genome bins across the whole genome, then removes bins with less than a desired minimum number of counts in the bin, then merges adjacent tiles into a single region.

Usage

AggregateTiles(object, ...)

Arguments

object	A Seurat object or ChromatinAssay object
...	Additional arguments passed to other methods

Value

genome tiles

Examples

print("see https://satijalab.org/signac/reference/aggregatetiles")

Honchkrow/SignacSlim documentation built on April 9, 2022, 1:49 a.m.