getInterCellTypeWeight: Filter adjacency weight matrix to between two subsets of...
In JEFworks/MERingue: Characterizing spatial gene expression heterogeneity in spatially resolved single-cell transcriptomics data with non-uniform cellular densities

getInterCellTypeWeight

R Documentation

Filter adjacency weight matrix to between two subsets of points

Restrict adjacency relationships to between two subsets of points

getInterCellTypeWeight(cct, nct, weight, pos = NULL, plot = FALSE, ...)

`cct`	Cells of cell-type 1
`nct`	Cells of cell-type 2 (assumed to be mutually exclusive with cct)
`weight`	Adjacency weight matrix
`pos`	Position
`plot`	Boolean of whether to plot
`...`	Additional plotting parameters

Boolean matrix where value = 1 if two cells are considered adjacency ie. neighbors, else 0

JEFworks/MERingue documentation built on June 11, 2022, 4:16 a.m.

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