plotNetwork: Plot an adjacency weight matrix as a network Adapted from...

In JEFworks/MERingue: Characterizing spatial gene expression heterogeneity in spatially resolved single-cell transcriptomics data with non-uniform cellular densities

Plot an adjacency weight matrix as a network Adapted from https://stackoverflow.com/questions/43879347/plotting-a-adjacency-matrix-using-pure-r

Description

Plot an adjacency weight matrix as a network Adapted from https://stackoverflow.com/questions/43879347/plotting-a-adjacency-matrix-using-pure-r

Usage

plotNetwork(pos, adj, col = "black", line.col = "grey", line.power = 1, ...)

Arguments

pos	Position matrix
adj	Adjacency weight matrix
col	Color of points
line.col	Color of line
line.power	Thickness of lines
...	Additional plotting parameters

Value

None

Examples

data(mOB)
pos <- mOB$pos
w <- getSpatialNeighbors(pos)
plotNetwork(pos, w)

JEFworks/MERingue documentation built on June 11, 2022, 4:16 a.m.