circulaR: circulaR pipeline wrapper

Description Usage Arguments Value circulaR functions Examples

Description

Performs all nescesary steps for filtering, identifying and generate information on backsplice junction candidates

The foo package provides three categories of important functions: foo, bar and baz.

Usage

1
circulaR(object, annotationDB, cores = 1L, ...)

Arguments

object

circSample or circExperiment object

annotationDB

A TxDb or EnsDb object

cores

Only supported on unix! Number of cores used for parallel processing for circExperiment objets.

...
chromosomes

Character vector on which chromosomes to keep, while discardin all other chromosomes. The default value (NULL)

Value

circSample or circExperiment with all data slots populated with processed data

circulaR functions

The foo functions ...

Examples

1
#circulaR(circExperiment)

KasperThystrup/circulaR documentation built on March 14, 2021, 12:44 p.m.