firstread.firststrand: Accessor for the strandedness protocol of sample library...
In KasperThystrup/circulaR: Characterization of circRNAs from Total RNA-seq data

Description Usage Arguments Value Examples

circSample and circExperiment class accessors for showing whether the sample are prepared using e.g. dUTP- or unstranded protocol

1	firstread.firststrand(object)

object

circSample or circExperiment object

Logical vector with a boolean value stating if the library preparationion protocol yielded firstread-firststrand reads

# The logical value whether the protocol yielded firstread-firststrand reads in a sample object
#firstread.firststrand(sample.object)

# The logical value whether the protocol yielded firstread-firststrand reads in each sample of an experiment
#firstread.firststrand(experiment.object)

KasperThystrup/circulaR documentation built on March 14, 2021, 12:44 p.m.