consensusCluster: Make consensus clusters across multiple samples.

Description Usage Arguments Examples

Description

Makes consensus clusters from multiple samples in TSSr object and calculates inter-quantile positions within consensus clusters for each sample.

Usage

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consensusCluster(object, dis = 50
, useMultiCore=TRUE, numCores = NULL)

## S4 method for signature 'TSSr'
consensusCluster(object, dis = 50, useMultiCore = TRUE, numCores = NULL)

Arguments

object

A TSSr object.

dis

Minimum distance between two peaks to be aggregated together into the same consensus cluster.

useMultiCore

Logical indicating whether multiple cores are used (TRUE) or not (FALSE). Default is FALSE.

numCores

Number of cores are used in clustering step. Used only if useMultiCore = TRUE. Default is NULL.

Examples

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Linlab-slu/TSSr documentation built on July 28, 2021, 12:59 a.m.