exportClustersToBed: Creating bed files of clusters

In Linlab-slu/TSSr: TSS sequencing data analysis

Creating bed files of clusters

Description

Creates bed files of clusters.

Usage

exportClustersToBed(object, data = "consensusClusters", assigned = TRUE)

## S4 method for signature 'TSSr'
exportClustersToBed(object, data = "consensusClusters", assigned = TRUE)

Arguments

object	A TSSr object.
data	Specify which data will be exported: "tagClusters" or "consensusClusters". Default is "consensusClusters".
assigned	Specify which consensus clusters will be exported. Used only if data = "consensusClusters. Default is TRUE.

Value

bed files of clusters

Examples

data(exampleTSSr)
#exportTSStoBedgraph(exampleTSSr, data = "tagClusters")
#exportTSStoBedgraph(exampleTSSr, data = "consensusClusters")

Linlab-slu/TSSr documentation built on Oct. 24, 2023, 8:32 p.m.