deepblue_list_biosources: list_biosources
In MPIIComputationalEpigenetics/DeepBlueR: DeepBlueR
Description
Usage
Arguments
Value
See Also
Examples
Description
List BioSources included in DeepBlue. A BioSource refers to a term describing the origin of a given sample, such as a tissue or cell line. It is possible to filter the BioSources by their extra_metadata fields content. These fields vary depending on the original data source.
Usage
1
2
deepblue_list_biosources(extra_metadata = NULL,
user_key = deepblue_options("user_key"))
Arguments
extra_metadata
- A struct (Metadata that must be matched)
user_key
- A string (users token key)
Value
biosources - A array (biosources names and IDS)
See Also
Other Inserting and listing biosources: deepblue_list_similar_biosources
Examples
1
deepblue_list_biosources(extra_metadata = list(ontology_id = "UBERON:0002485"))
MPIIComputationalEpigenetics/DeepBlueR documentation built on Aug. 11, 2021, 4:12 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value See Also Examples
Description
List BioSources included in DeepBlue. A BioSource refers to a term describing the origin of a given sample, such as a tissue or cell line. It is possible to filter the BioSources by their extra_metadata fields content. These fields vary depending on the original data source.
Usage
1 2 | deepblue_list_biosources(extra_metadata = NULL,
user_key = deepblue_options("user_key"))
|
Arguments
extra_metadata |
- A struct (Metadata that must be matched) |
user_key |
- A string (users token key) |
Value
biosources - A array (biosources names and IDS)
See Also
Other Inserting and listing biosources: deepblue_list_similar_biosources
Examples
1 | deepblue_list_biosources(extra_metadata = list(ontology_id = "UBERON:0002485"))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.