calculate.pdr.site: calculate.pdr.site This function computes the PDR score for a...
In MPIIComputationalEpigenetics/WSHPackage: R package for the calculation of the following Within-Sample Heterogeneity Scores in Bisulfite Sequencing Data: FDRP, qFDRP, PDR, Epipolymorphism, Methylation Entropy and MHL
Description
Usage
Arguments
Value
Author(s)
View source: R/calculate_scores.R
Description
calculate.pdr.site
This function computes the PDR score for a given cpg site.
Usage
1
calculate.pdr.site(cpg, reads)
Arguments
cpg
index of the cpg site
reads
GRanges object containing the reads needed for the calculation
of the PDR, already converted into the custom representation
Value
PDR score for the given CpG site
Author(s)
Michael Scherer
MPIIComputationalEpigenetics/WSHPackage documentation built on Dec. 14, 2021, 11:49 a.m.
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Description Usage Arguments Value Author(s)
View source: R/calculate_scores.R
Description
calculate.pdr.site This function computes the PDR score for a given cpg site.
Usage
1 | calculate.pdr.site(cpg, reads)
|
Arguments
cpg |
index of the cpg site |
reads |
GRanges object containing the reads needed for the calculation of the PDR, already converted into the custom representation |
Value
PDR score for the given CpG site
Author(s)
Michael Scherer
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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