run.methclone: run.methclone
In MPIIComputationalEpigenetics/WSHPackage: R package for the calculation of the following Within-Sample Heterogeneity Scores in Bisulfite Sequencing Data: FDRP, qFDRP, PDR, Epipolymorphism, Methylation Entropy and MHL
Description
Usage
Arguments
Author(s)
Description
Runs the methclone software
Usage
1
run.methclone(bam.file, out.folder = getwd(), out.name = "methclone")
Arguments
bam.file
path to bam file containing the reads for defining epialleles
out.folder
path to folder where methclones output should be stored
out.name
name of the output file
Author(s)
Michael Scherer
MPIIComputationalEpigenetics/WSHPackage documentation built on Dec. 14, 2021, 11:49 a.m.
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Description Usage Arguments Author(s)
Description
Runs the methclone software
Usage
1 | run.methclone(bam.file, out.folder = getwd(), out.name = "methclone")
|
Arguments
bam.file |
path to bam file containing the reads for defining epialleles |
out.folder |
path to folder where methclones output should be stored |
out.name |
name of the output file |
Author(s)
Michael Scherer
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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