Description Usage Arguments Value Examples
View source: R/rampFastQueryTab2.R
Use fast search algorithm to find all pathways from given analytes
1 2 | getAnalyteFromPathway(pathway, conpass = NULL, dbname = "ramp",
username = "root", host = "localhost")
|
pathway |
a string or a vector of strings that contains pathways of interest |
conpass |
password for database access (string) |
dbname |
name of the mysql database (default is "ramp") |
username |
username for database access (default is "root") |
host |
host name for database access (default is "localhost") |
a data.frame that contains all search results
1 2 3 4 5 | ## Not run:
con <- connectToRaMP(dbname="ramp",username="root",conpass="mypassword")
getAnalyteFromPathway <- pathway="sphingolipid metabolism",conpass="mypassword")
## End(Not run)
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