Description Usage Arguments Value
View source: R/rampQueryHelper.R
Find all synonym from a given metabolite's name This function is used to filter out some super common synonyms like glyceride Now, this function only format the user input, so the user vector, dataframe, and entire string separated by comma are working.
1 2 3 | rampFindSynonymFromSynonym(synonym, full = FALSE, find_synonym = FALSE,
conpass = NULL, dbname = "ramp", username = "root",
host = "localhost")
|
synonym |
name to search for |
full |
bool if return whole data.frame |
find_synonym |
bool if find all synonyms or just return same synonym |
conpass |
password for database access (string) |
dbname |
name of the mysql database (default is "ramp") |
username |
username for database access (default is "root") |
host |
host name for database access (default is "localhost") as input (there are some common synonyms that will mess up whole searching) |
a data frame that contains synonym in the first column rampId in the second column
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