plotCataNetwork: Plots a network based on gene-metabolite relationships
In Mathelab/RaMP-DB: RaMP (Relational Database of Metabolomic Pathways)
Description
Usage
Arguments
Value
Examples
View source: R/rampFastQueryTab4.R
Description
Plots a network based on gene-metabolite relationships
Usage
1
plotCataNetwork(catalyzedf = NULL)
Arguments
catalyzedf
a data.frame output by rampFastCata() that contains analytes that are in the same reaction
Value
An interactive HTML plot that allows the user to pan/zoom into regions of interest. User genes/metabolites are highlighted in blue, whereas analytes found by the function are orange.
Examples
1
2
3
4
5
## Not run:
catalyzedf <- rampFastCata(analytes="creatine",conpass="mypassword",NamesOrIds="names")
plotCataNetwork(catalyzedf)
## End(Not run)
Mathelab/RaMP-DB documentation built on April 24, 2021, 3:11 p.m.
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Description Usage Arguments Value Examples
View source: R/rampFastQueryTab4.R
Description
Plots a network based on gene-metabolite relationships
Usage
1 | plotCataNetwork(catalyzedf = NULL)
|
Arguments
catalyzedf |
a data.frame output by rampFastCata() that contains analytes that are in the same reaction |
Value
An interactive HTML plot that allows the user to pan/zoom into regions of interest. User genes/metabolites are highlighted in blue, whereas analytes found by the function are orange.
Examples
1 2 3 4 5 | ## Not run:
catalyzedf <- rampFastCata(analytes="creatine",conpass="mypassword",NamesOrIds="names")
plotCataNetwork(catalyzedf)
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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