Files in Morriseylab/scExtras
Single cell data analysis helper functions
.DS_Store
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/ClusterDR.R
R/CreateSeuratObj.R
R/DotPlotTopGenes.R
R/HeatMapTopGenes.R
R/Plotting.R
R/RunDiffusion.R
R/RunDoubletfinder.R
R/RunQC.R
R/SlingShot.R
R/Utilities.R
R/getClusterMarkers.R
R/getMaxDim.R
R/ligrec.R
R/markerGenes_human.R
R/markerGenes_mouse.R
R/plotLRHeatmap.R
R/plotLRnetwork.R
R/processExper.R
R/runtopgene.R
README.md
RunSeurat_fullscript.R
SeuratExtras.Rproj
data/Hs_PairsLigRec.RData
data/Mm_PairsLigRec.RData
data/colorpallette.RData
data/mouse_human.csv
data/mouseortholog.RData
man/BiGenePlot.Rd
man/ClusterDR.Rd
man/CurvePlot.Rd
man/DimPCAPlot.Rd
man/DotPlotTopGenes.Rd
man/HeatMapTopGenes.Rd
man/LineageFeaturePlot.Rd
man/PCAPwPlot.Rd
man/PCATools.Rd
man/RunDiffusion.Rd
man/RunDoubletfinder.Rd
man/RunLigRec.Rd
man/RunQC.Rd
man/SplitMetaPlot.Rd
man/celltypeVlnPlot.Rd
man/getClusterMarkers.Rd
man/getMaxDim.Rd
man/getSDS.Rd
man/lineageDimPlot.Rd
man/make3dPlot.Rd
man/plotLRHeatmap.Rd
man/plotLRnetwork.Rd
man/plotLineageHeatMap.Rd
man/plotLineangeGene.Rd
man/processExper.Rd
man/projectname-Project-name.Rd
man/runPseudoTimeDGE.Rd
man/runSlingshot.Rd
man/runtopgene.Rd
man/sampleBarGraph.Rd
man/setSDS.Rd
