call_consensus: get concensus calls for a list of cor calls

In NCBI-Hackathons/RClusterCT: Classifier for Single-cell RNA-seq Using Cell Clusters

get concensus calls for a list of cor calls

Description

get concensus calls for a list of cor calls

Usage

call_consensus(list_of_res)

Arguments

list_of_res

list of call dataframes from cor_to_call_rank

Value

dataframe of cluster, new ident, and mean rank

Examples

res <- clustify(
    input = pbmc_matrix_small,
    metadata = pbmc_meta,
    cluster_col = "classified",
    ref_mat = cbmc_ref
)

res2 <- cor_to_call_rank(res, threshold = "auto")
res3 <- cor_to_call_rank(res)
call_consensus(list(res2, res3))

NCBI-Hackathons/RClusterCT documentation built on Aug. 30, 2024, 2:05 a.m.