run_cca: Run CCA
In NWhitener/benchmarking: Benchmarking Tools For Single Cell RNA Sequencing Datasets
run_cca R Documentation
Run CCA
Description
This function runs the data integration protocol detailed in the Seurat "Introduction to scRNA-seq
integration" found at https://satijalab.org/seurat/articles/integration_introduction.html. This function completes the cca integration process using the first data set as a reference as described at https://satijalab.org/seurat/articles/integration_large_datasets.html
Use run_cca_integration_workflow() for the entire workflow process
Usage
run_cca(dataList)
Arguments
dataList
A list of data sets to integrate using the cca protocol
Value
A data list of the combined data from the cca protocol
NWhitener/benchmarking documentation built on Oct. 23, 2023, 12:20 a.m.
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| run_cca | R Documentation |
Run CCA
Description
This function runs the data integration protocol detailed in the Seurat "Introduction to scRNA-seq integration" found at https://satijalab.org/seurat/articles/integration_introduction.html. This function completes the cca integration process using the first data set as a reference as described at https://satijalab.org/seurat/articles/integration_large_datasets.html Use run_cca_integration_workflow() for the entire workflow process
Usage
run_cca(dataList)
Arguments
dataList |
A list of data sets to integrate using the cca protocol |
Value
A data list of the combined data from the cca protocol
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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