run_fastmnn: Run fastmnn
In NWhitener/benchmarking: Benchmarking Tools For Single Cell RNA Sequencing Datasets
run_fastmnn R Documentation
Run fastmnn
Description
This function runs the data integration protocol detailed in the Seurat Wrappers protocol https://github.com/satijalab/seurat-wrappers/blob/master/docs/fast_mnn.md
This function completes the fastmnn process on
the datasets. Use run_fastmnn_integration_workflow() for the entire workflow process
Usage
run_fastmnn(dataList, batchName = "SID")
Arguments
dataList
A list of data sets to integrate using the fastmnn protocol
batchName
The annotation name to group data sets by, defaults to "ID"
Value
A data list of the combined data from the fastmnn protocol
NWhitener/benchmarking documentation built on Oct. 23, 2023, 12:20 a.m.
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| run_fastmnn | R Documentation |
Run fastmnn
Description
This function runs the data integration protocol detailed in the Seurat Wrappers protocol https://github.com/satijalab/seurat-wrappers/blob/master/docs/fast_mnn.md This function completes the fastmnn process on the datasets. Use run_fastmnn_integration_workflow() for the entire workflow process
Usage
run_fastmnn(dataList, batchName = "SID")
Arguments
dataList |
A list of data sets to integrate using the fastmnn protocol |
batchName |
The annotation name to group data sets by, defaults to "ID" |
Value
A data list of the combined data from the fastmnn protocol
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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