API for NicWir/VisomX
User-Friendly and Comprehensive Analysis and Visualization of Omics Data
| Global functions | |
|---|---|
| .onAttach | Man page |
| Get.bwss | Man page |
| GetDefaultPLSCVComp | Source code |
| GetShapeSchema | Source code |
| Intersect | Man page |
| Perform.permutation | Man page |
| Setdiff | Man page |
| Union | Man page |
| colFmt | Man page Source code |
| delete_prefix | Man page |
| fast.write.csv | Man page Source code |
| filter_missval | Man page |
| flux_to_map | Man page |
| get_prefix | Man page |
| make_se | Man page |
| manual_impute | Man page |
| meanSdPlot | Man page |
| met.ANOVA.Anal | Man page |
| met.FC.Anal | Man page |
| met.FilterVariable | Man page |
| met.GetFC | Man page |
| met.GetTtestRes | Man page |
| met.PCA.Anal | Man page |
| met.PLSDA.CV | Man page |
| met.PLSDA.Permut | Man page |
| met.PLSR.Anal | Man page |
| met.PerformFeatureFilter | Man page |
| met.PreparePrenormData | Man page |
| met.SanityCheck | Man page |
| met.Ttests.Anal | Man page |
| met.UpdateData | Man page |
| met.impute | Man page |
| met.initialize | Man page |
| met.normalize | Man page |
| met.plot_ANOVA | Man page |
| met.plot_CorrHeatMap_Features | Man page |
| met.plot_CorrHeatMap_Samples | Man page |
| met.plot_FeatureNormSummary | Man page |
| met.plot_ImpVar | Man page |
| met.plot_PCA2DLoading | Man page |
| met.plot_PCA2DScore | Man page |
| met.plot_PCA3DLoading | Man page |
| met.plot_PCA3DScore | Man page |
| met.plot_PCAScree | Man page |
| met.plot_PLS.Crossvalidation | Man page |
| met.plot_PLS.Permutation | Man page |
| met.plot_PLS2DLoading | Man page |
| met.plot_PLS2DScore | Man page |
| met.plot_PLS3DLoading | Man page |
| met.plot_PLS3DScore | Man page |
| met.plot_PLSImpScatter | Man page Source code |
| met.plot_PLS_Imp | Man page |
| met.plot_SampleNormSummary | Man page |
| met.plot_detect | Man page |
| met.plot_heatmap | Man page |
| met.plot_missval | Man page |
| met.plot_volcano | Man page |
| met.print_PCA3DLoading | Man page |
| met.print_PCA3DScore | Man page |
| met.print_PLS3DLoading | Man page |
| met.print_PLS3DScore | Man page |
| met.read_data | Man page |
| met.report | Man page Source code |
| met.report_test_normalization | Man page Source code |
| met.test_normalization | Man page Source code |
| met.workflow | Man page |
| move.file | Source code |
| pathway_enrich | Man page |
| plot_coverage | Man page |
| png_to_gif | Man page |
| prot.add_rejections | Man page |
| prot.boxplot_intensity | Man page |
| prot.filter_missing | Man page |
| prot.get_kegg_pathways | Man page Source code |
| prot.get_pathway_genes | Source code |
| prot.get_results | Man page |
| prot.impute | Man page |
| prot.make_unique | Man page |
| prot.normalize_vsn | Man page |
| prot.pca | Man page |
| prot.plot_bar | Man page |
| prot.plot_corrheatmap | Man page |
| prot.plot_density | Man page Source code |
| prot.plot_detect | Man page |
| prot.plot_enrichment | Man page |
| prot.plot_heatmap | Man page |
| prot.plot_heatmap_all | Man page |
| prot.plot_imputation | Man page Source code |
| prot.plot_loadings | Man page |
| prot.plot_missval | Man page |
| prot.plot_numbers | Man page |
| prot.plot_pca | Man page |
| prot.plot_screeplot | Man page |
| prot.plot_upset | Man page |
| prot.plot_volcano | Man page |
| prot.read_data | Man page |
| prot.report | Man page |
| prot.test_diff | Man page |
| prot.workflow | Man page |
| prot_to_map | Man page |
| read_file | Man page Source code |
| read_flux | Man page Source code |
| rna.filter_missing | Man page |
| rna.impute | Man page |
| rna.make_se | Man page |
| rna.plot_bar | Man page |
| rna.plot_corrheatmap | Man page |
| rna.plot_heatmap | Man page |
| rna.plot_imputation | Man page |
| rna.plot_numbers | Man page |
| rna.plot_pca | Man page |
| rna.plot_volcano | Man page |
| rna.read_data | Man page |
| rna.report | Man page |
| rna.workflow | Man page |
| sum.na | Source code |
| suppress_warnings | Source code |
| svg_to_pdf | Man page |
| svg_to_png | Man page |
| theme_DEP1 | Man page |
| theme_DEP2 | Man page |
| var.na | Source code |
