exportResults.DESeq2: Export results for DESeq2 analyses
In PF2-pasteur-fr/SARTools: Statistical Analysis of RNA-Seq Tools
View source: R/exportResults.DESeq2.R
exportResults.DESeq2 R Documentation
Export results for DESeq2 analyses
Description
Export counts and DESeq2 results
Usage
exportResults.DESeq2(out.DESeq2, group, alpha = 0.05, export = TRUE)
Arguments
out.DESeq2
the result of run.DESeq2()
group
factor vector of the condition from which each sample belongs
alpha
threshold to apply to adjusted p-values
export
TRUE to export the results (up, down and complete table) in the tables directory
Value
A list of data.frame containing counts, pvalues, FDR, log2FC...
Author(s)
Marie-Agnes Dillies and Hugo Varet
PF2-pasteur-fr/SARTools documentation built on April 6, 2022, 2:24 a.m.
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View source: R/exportResults.DESeq2.R
| exportResults.DESeq2 | R Documentation |
Export results for DESeq2 analyses
Description
Export counts and DESeq2 results
Usage
exportResults.DESeq2(out.DESeq2, group, alpha = 0.05, export = TRUE)
Arguments
out.DESeq2 |
the result of |
group |
factor vector of the condition from which each sample belongs |
alpha |
threshold to apply to adjusted p-values |
export |
TRUE to export the results (up, down and complete table) in the tables directory |
Value
A list of data.frame containing counts, pvalues, FDR, log2FC...
Author(s)
Marie-Agnes Dillies and Hugo Varet
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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