descriptionPlots: Description plots of the counts

In PF2-pasteur-fr/SARTools: Statistical Analysis of RNA-Seq Tools

Description plots of the counts

Description

Description plots of the counts according to the biological condition

Usage

descriptionPlots(
  counts,
  group,
  col = c("lightblue", "orange", "MediumVioletRed", "SpringGreen"),
  ggplot_theme = theme_light()
)

Arguments

counts	matrix of counts
group	factor vector of the condition from which each sample belongs
col	colors for the plots (one per biological condition)
ggplot_theme	ggplot2 theme function (theme_light() by default)

Value

PNG files in the "figures" directory and the matrix of the most expressed sequences

Author(s)

Hugo Varet

PF2-pasteur-fr/SARTools documentation built on April 6, 2022, 2:24 a.m.