Files in PF2-pasteur-fr/SARTools
Statistical Analysis of RNA-Seq Tools

.gitignore
DESCRIPTION
NAMESPACE
NEWS
R/BCVPlot.R R/MAPlot.R R/MDSPlot.R R/NAMESPACE.R R/PCAPlot.R R/SARTools-package.r R/SERE.r R/barplotNull.R R/barplotTotal.R R/cairoSizeWrapper.R R/checkParameters.DESeq2.r R/checkParameters.edgeR.r R/clusterPlot.R R/countsBoxplots.R R/densityPlot.R R/descriptionPlots.r R/diagSizeFactorsPlots.R R/dispersionsPlot.R R/exploreCounts.R R/exportResults.DESeq2.R R/exportResults.edgeR.R R/loadCountData.R R/loadTargetFile.R R/majSequences.R R/nDiffTotal.r R/pairwiseScatterPlots.R R/rawpHist.R R/removeNull.R R/run.DESeq2.r R/run.edgeR.r R/summarizeResults.DESeq2.r R/summarizeResults.edgeR.r R/tabIndepFiltering.R R/tabSERE.R R/volcanoPlot.r R/welcome.R R/writeReport.DESeq2.r R/writeReport.edgeR.r README.md
inst/CITATION
inst/bibliography.bib
inst/medecine-sciences.csl
inst/raw/KO1.htseq.out
inst/raw/KO2.htseq.out
inst/raw/WT1.htseq.out
inst/raw/WT2.htseq.out
inst/report_DESeq2.rmd inst/report_edgeR.rmd
inst/target.txt
man/BCVPlot.Rd man/MAPlot.Rd man/MDSPlot.Rd man/PCAPlot.Rd man/SARTools-package.Rd man/SERE.Rd man/barplotNull.Rd man/barplotTotal.Rd man/cairoSizeWrapper.Rd man/checkParameters.DESeq2.Rd man/checkParameters.edgeR.Rd man/clusterPlot.Rd man/countsBoxplots.Rd man/densityPlot.Rd man/descriptionPlots.Rd man/diagSizeFactorsPlots.Rd man/dispersionsPlot.Rd man/exploreCounts.Rd man/exportResults.DESeq2.Rd man/exportResults.edgeR.Rd man/loadCountData.Rd man/loadTargetFile.Rd man/majSequences.Rd man/nDiffTotal.Rd man/pairwiseScatterPlots.Rd man/rawpHist.Rd man/removeNull.Rd man/run.DESeq2.Rd man/run.edgeR.Rd man/summarizeResults.DESeq2.Rd man/summarizeResults.edgeR.Rd man/tabIndepFiltering.Rd man/tabSERE.Rd man/volcanoPlot.Rd man/writeReport.DESeq2.Rd man/writeReport.edgeR.Rd template_script_DESeq2.r template_script_DESeq2_CL.r template_script_edgeR.r template_script_edgeR_CL.r vignettes/SARTools.rmd
vignettes/figures/batchclusterPCA.png
vignettes/figures/diagSF.png
vignettes/figures/inversionclusterPCA.png
vignettes/figures/inversionpairwiseScatter.png
vignettes/figures/inversionrawpHist.png
vignettes/figures/outlierPCA.png
vignettes/figures/outlierbarplots.png
PF2-pasteur-fr/SARTools documentation built on June 2, 2018, 2:25 p.m.