plot.movement.matrix: Plot the movement esimated movement for a single MFCLPar or...

Description Usage Arguments

View source: R/plot.movement.matrix.r

Description

Plot the movement esimated movement for a single MFCLPar or the difference in the estimated movements for two pars with the same spatial, seasonal, age structure.

Usage

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plot.movement.matrix(
  pars,
  par.names = NULL,
  age.vec = NULL,
  season.vec = NULL,
  save.dir,
  save.name
)

Arguments

pars

a list of two MFCLPar objects or a single MFCLPar object. The reference model should be the first in the list.

par.names

an optional vector of character strings naming the models for plotting purposes. If not supplied, model names will be taken from the names in the par.list (if available) or generated automatically.

age.vec

An integer value or vector denoting the age class or classes to plot the movement for. If missing, the average movement across all ages is plotted.

season.vec

An integer value or vector of integers denoting which seasons to plot the movement for. If missing then the average movement across seasons is plotted.

save.dir

Path to the directory where the outputs will be saved

save.name

Name stem for the output, useful when saving many model outputs in the same directory


PacificCommunity/ofp-sam-diags4MFCL documentation built on July 18, 2021, 9:25 a.m.