write.mafSummary: Writes maf summaries to output tab-delimited text files.
In PoisonAlien/maftools: Summarize, Analyze and Visualize MAF Files

write.mafSummary

R Documentation

Writes maf summaries to output tab-delimited text files.

Description

Writes maf summaries to output tab-delimited text files.

Usage

write.mafSummary(maf, basename = NULL, compress = FALSE)

Arguments

`maf`	an `MAF` object generated by `read.maf`
`basename`	basename for output file to be written.
`compress`	If 'TRUE' files will be gz compressed. Default 'FALSE'

Details

Writes MAF and related summaries to output files.

Value

None. Writes output as text files.

Examples

laml.maf <- system.file("extdata", "tcga_laml.maf.gz", package = "maftools")
laml <- read.maf(maf = laml.maf)
write.mafSummary(maf = laml, basename = 'laml')

PoisonAlien/maftools documentation built on April 7, 2024, 2:49 a.m.