FuentesIliGutData: FuentesIliGutData
In RIVM-IIV-Microbiome/biomeUtils: Utilities for microbiome analytics
FuentesIliGutData R Documentation
FuentesIliGutData
Description
Fuentes S, et al. (2021) data in which the authors investigated
associations between gut microbiota in respiratory infections and
local and systemic immune markers in older adults during an influenza
season.
Usage
data(FuentesIliGutData)
Format
Phyloseq object
Details
FuentesIliGutData consists of 905 taxa (ASV-level) in 589 samples from
397 participants. The samples include follow-up (recovery) samples
that were collected 7–9 weeks after the ILI event.
Data on co-morbidities, medications, symptoms, pathogens are made
available.
Value
Loads the data set in R.
Author(s)
Sudarshan Shetty sudarshanshetty9@gmail.com
References
Fuentes S, et al. (2021) Associations of faecal microbiota
with influenza-like illness in participants aged 60 years or
older: an observational study.
The Lancet Healthy Longevity, 2(1):e13-23.
https://doi.org/10.1016/S2666-7568(20)30034-9
Ferreira JA, Fuentes S. (2020). Some comments on certain
statistical aspects of the study of the microbiome.
Briefings in bioinformatics 21(4), pp.1487-1494.
https://doi.org/10.1093/bib/bbz077
RIVM-IIV-Microbiome/biomeUtils documentation built on July 20, 2023, 10:29 a.m.
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| FuentesIliGutData | R Documentation |
FuentesIliGutData
Description
Fuentes S, et al. (2021) data in which the authors investigated associations between gut microbiota in respiratory infections and local and systemic immune markers in older adults during an influenza season.
Usage
data(FuentesIliGutData)
Format
Phyloseq object
Details
FuentesIliGutData consists of 905 taxa (ASV-level) in 589 samples from 397 participants. The samples include follow-up (recovery) samples that were collected 7–9 weeks after the ILI event. Data on co-morbidities, medications, symptoms, pathogens are made available.
Value
Loads the data set in R.
Author(s)
Sudarshan Shetty sudarshanshetty9@gmail.com
References
Fuentes S, et al. (2021) Associations of faecal microbiota with influenza-like illness in participants aged 60 years or older: an observational study. The Lancet Healthy Longevity, 2(1):e13-23. https://doi.org/10.1016/S2666-7568(20)30034-9
Ferreira JA, Fuentes S. (2020). Some comments on certain statistical aspects of the study of the microbiome. Briefings in bioinformatics 21(4), pp.1487-1494. https://doi.org/10.1093/bib/bbz077
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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