cleanTaxonomy: Clean Taxonomy

View source: R/cleanTaxonomy.R

cleanTaxonomyR Documentation

Clean Taxonomy

Description

Clean Taxonomy

Usage

cleanTaxonomy(x)

Arguments

x

A phyloseq object

Details

Removes, special characters, spaces and prefixes in tax_table.

Value

phyloseq

Author(s)

Sudarshan A. Shetty

Examples

library(biomeUtils)
data("FuentesIliGutData")
ps1 <- cleanTaxonomy(FuentesIliGutData)
ps1

RIVM-IIV-Microbiome/biomeUtils documentation built on July 20, 2023, 10:29 a.m.