cleanTaxonomy: Clean Taxonomy
In RIVM-IIV-Microbiome/biomeUtils: Utilities for microbiome analytics
View source: R/cleanTaxonomy.R
cleanTaxonomy R Documentation
Clean Taxonomy
Description
Clean Taxonomy
Usage
cleanTaxonomy(x)
Arguments
x
A phyloseq object
Details
Removes, special characters, spaces and prefixes in tax_table.
Value
phyloseq
Author(s)
Sudarshan A. Shetty
Examples
library(biomeUtils)
data("FuentesIliGutData")
ps1 <- cleanTaxonomy(FuentesIliGutData)
ps1
RIVM-IIV-Microbiome/biomeUtils documentation built on July 20, 2023, 10:29 a.m.
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View source: R/cleanTaxonomy.R
| cleanTaxonomy | R Documentation |
Clean Taxonomy
Description
Clean Taxonomy
Usage
cleanTaxonomy(x)
Arguments
x |
A phyloseq object |
Details
Removes, special characters, spaces and prefixes in tax_table.
Value
phyloseq
Author(s)
Sudarshan A. Shetty
Examples
library(biomeUtils)
data("FuentesIliGutData")
ps1 <- cleanTaxonomy(FuentesIliGutData)
ps1
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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