calcTpm: given a vector or matrix of est_counts and the same for...
In RamsinghLab/arkas_staging: A package that complements Kallisto for quick, informative *seq analysis
Description
Usage
Arguments
Value
Description
given a vector or matrix of est_counts and the same for eff_len, compute TPM
Usage
1
calcTpm(est_counts, eff_len)
Arguments
est_counts
estimated counts, usually from an HDF5 file
eff_len
effective transcipt lengths, usually from an HDF5 file
Value
either a vector or a matrix of TPMs (matches the args)
RamsinghLab/arkas_staging documentation built on March 14, 2021, 11:40 a.m.
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Description Usage Arguments Value
Description
given a vector or matrix of est_counts and the same for eff_len, compute TPM
Usage
1 | calcTpm(est_counts, eff_len)
|
Arguments
est_counts |
estimated counts, usually from an HDF5 file |
eff_len |
effective transcipt lengths, usually from an HDF5 file |
Value
either a vector or a matrix of TPMs (matches the args)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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