create_refspace_seq | R Documentation |
Given a vector of read sequences and their corresponding cigars, returns the sequences in the reference space by removing soft clippings, removing insertions (relative to the reference), and inserting "-" for deletions (relative to the reference)
create_refspace_seq(seq, cigar)
seq |
Read sequences |
cigar |
Read cigars |
A vector of sequences in the reference space. Insertions are ignored since they are not in the reference space
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