filter_true_variants.read_table: Filter read table for variant calls

filter_true_variants.read_tableR Documentation

Filter read table for variant calls

Description

Filter read table for variant calls

Usage

filter_true_variants.read_table(df, variant_calls, consensus_values)

Arguments

df

read_table

variant_calls

variant calls data.frame, see read_table() help

consensus_values

consensus nucleotides at variable positions

Details

nrow of variant calls must equal length of conseunsus values

Value

a data.frame in which errors (i.e. not called varaints) are replaced by the consensus value.


SLeviyang/RegressHaplo documentation built on June 1, 2022, 10:48 p.m.