haplotype_match.readFit: Determine haplotypes that match a nucleotide pattern
In SLeviyang/RegressHaplo: Haplotype Reconstruction Using Penalized Regression
haplotype_match.readFit R Documentation
Determine haplotypes that match a nucleotide pattern
Description
Given a nucleotide pattern covering some portion of
read table positions, return a vector of 1's and 0's
representing haplotypes that match the patterh
Usage
haplotype_match.readFit(nucs, h)
Arguments
nucs
A character vector equal to the number of positions
in the read table. Positions at which nuceotides are not specified
have value "+".
df
read table
haplotype
matrix
Value
A numeric vector of 1's and 0's
SLeviyang/RegressHaplo documentation built on June 1, 2022, 10:48 p.m.
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| haplotype_match.readFit | R Documentation |
Determine haplotypes that match a nucleotide pattern
Description
Given a nucleotide pattern covering some portion of read table positions, return a vector of 1's and 0's representing haplotypes that match the patterh
Usage
haplotype_match.readFit(nucs, h)
Arguments
nucs |
A character vector equal to the number of positions in the read table. Positions at which nuceotides are not specified have value "+". |
df |
read table |
haplotype |
matrix |
Value
A numeric vector of 1's and 0's
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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