occurrences.singleseq: Counts the number of occurrences of a list of (short target...
In Santaris/seqtools: Tools for oligonucleotide-centric sequence analysis
Description
Counts the number of occurrences of a list of (short target site) sequences in a SINGLE other (transcript) sequence, allowing for mismatches
Usage
1
occurrences.singleseq(target.sites, seq.in, max.mismatch = 2)
Arguments
target.sites
character vector or DNAStringSet
seq.in
bla
max.mismatch
default=2
Santaris/seqtools documentation built on May 9, 2019, 12:44 p.m.
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Description
Counts the number of occurrences of a list of (short target site) sequences in a SINGLE other (transcript) sequence, allowing for mismatches
Usage
1 | occurrences.singleseq(target.sites, seq.in, max.mismatch = 2)
|
Arguments
target.sites |
character vector or DNAStringSet |
seq.in |
bla |
max.mismatch |
default=2 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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