occurrences.singleseq: Counts the number of occurrences of a list of (short target...

Description Usage Arguments

Description

Counts the number of occurrences of a list of (short target site) sequences in a SINGLE other (transcript) sequence, allowing for mismatches

Usage

1
occurrences.singleseq(target.sites, seq.in, max.mismatch = 2)

Arguments

target.sites

character vector or DNAStringSet

seq.in

bla

max.mismatch

default=2


Santaris/seqtools documentation built on May 9, 2019, 12:44 p.m.