Description Usage Arguments See Also Examples
This function filters LNA-oligos based on sequence, sugar modification and backbone and returns the upper-/lower case representation. Only oligos suitable for the oligo-predictors are accepted. All nucleobases other than A, C, G, T, U and E, sugar modifications other than L and D and backbones other than S (phosphorothioate) are excluded and result in NA.
1 | seqmod2uplow.strict(line.in)
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line.in |
a character vector of length 3 where the first element is the sequence (e.g. ACGTGTTT), the second element the modification (e.g. LLLDDDLL) and the third is the backbone (e.g. SSSSSSSS). |
1 | seqmod2uplow.strict(c("ACGTGTTT","LLLDDDLL","SSSSSSSS"))
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