GetClusterCVs: Get CV values for all clusters

View source: R/2_buildSOM.R

GetClusterCVsR Documentation

Get CV values for all clusters

Description

Get CV values for all clusters

Usage

GetClusterCVs(fsom)

Arguments

fsom

FlowSOM object as generated by the FlowSOM function or the BuildSOM function

Value

Matrix with coefficient of variation values for each marker

fileName <- system.file("extdata", "68983.fcs", package = "FlowSOM") flowSOM.res <- FlowSOM(fileName, compensate = TRUE, transform = TRUE, scale = TRUE, colsToUse = c(9, 12, 14:18), nClus = 10) cvs <- GetClusterCVs(flowSOM.res)


SofieVG/FlowSOM documentation built on Feb. 1, 2024, 11:33 a.m.