get_channels: get_channels

In SofieVG/FlowSOM: Using self-organizing maps for visualization and interpretation of cytometry data

get_channels

Description

Get channel names for an array of markers, given a flowFrame

Usage

get_channels(ff, markers)

Arguments

ff	The flowFrame of interest
markers	Vector with markers or channels of interest

Value

Corresponding channel names

See Also

get_markers

Examples

   # Read the flowFrame
   fileName <- system.file("extdata", "68983.fcs", package="FlowSOM")
   ff <- flowCore::read.FCS(fileName)
   GetChannels(ff, c("FSC-A", "CD3", "FITC-A"))
   GetMarkers(ff, c("FSC-A", "CD3", "FITC-A"))

SofieVG/FlowSOM documentation built on Feb. 1, 2024, 11:33 a.m.