TeamMacLean/atacr: Analysing Capture Seq Count Data

This package helps with the analysis of count data from RNA and ATAC capture-seq experiments. Using BioConductor RangedSummarizedExperiment objects, atacr implements a set of helper functions and quality control plots specific to the analysis of particularly windows. Especially, atacr is useful for performing control window based between sample normalizations and for easily running non-standard tests for differentially accessible windows in common reference designs.

Getting started

Package details

LicenseMIT + file LICENSE
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
TeamMacLean/atacr documentation built on May 9, 2019, 4:24 p.m.