find_controls_by_GoF: find control windows by convergence method in...

Description Usage Arguments Value

Description

find control windows by convergence method in https://academic.oup.com/biostatistics/article/13/3/523/248016/Normalization-testing-and-false-discovery-rate

Usage

1
find_controls_by_GoF(atacr, which = "bait_windows")

Arguments

atacr

a list of SummarizedExperiment objects from atacr::make_counts()

which

the subdivision of the genome to calculate GoF either 'whole_genome', 'bait_windows' or 'non_bait_windows'

Value

a character vector of window names


TeamMacLean/atacr documentation built on May 9, 2019, 4:24 p.m.