R/data.R

In YosefLab/SymSim: Simulate Single Cell RNA Sequencing Data

#' distribution of kinetic parameters learned from the Zeisel UMI cortex datasets
#' @name match_params
#' @docType data
#' @usage data(param_realdata.zeisel.imputed)
#' @format a data frame.
#' @keywords datasets
#' @examples 
#' data(param_realdata.zeisel.imputed)
"match_params"


#' a pool of gene lengths to sample from
#' @name gene_len_pool
#' @docType data
#' @usage data(gene_len_pool)
#' @format a vector.
#' @keywords datasets
#' @examples 
#' data(gene_len_pool)
"gene_len_pool"


#' from transcript length to number of fragments (for the nonUMI protocol)
#' @name len2nfrag
#' @docType data
#' @usage data(len2nfrag)
#' @format a vector.
#' @keywords datasets
#' @examples 
#' data(len2nfrag)
"len2nfrag"