applyFilters: Applies filters to the inputted expression data (may remove...

Description Usage Arguments Value

View source: R/Filters.R

Description

Applies filters to the inputted expression data (may remove rows)

Usage

1
applyFilters(expr, filterInput, threshold, num_mad)

Arguments

expr

a numeric expression matrix (genes x cells)

filterInput

list of filters to compute

threshold

minimum number of samples gene must be detected in to pass

num_mad

number of median absolute deviations to use in fano filter

Value

character vector of gene names passing filter


YosefLab/VISION documentation built on Sept. 14, 2021, 5:27 p.m.