clusterSignatures: Clusters signatures according to the rank sum

View source: R/methods-Signature.R

clusterSignaturesR Documentation

Clusters signatures according to the rank sum

Description

Clusters signatures according to the rank sum

Usage

clusterSignatures(sigMatrix, metaData, autocorrelation, clusterMeta)

Arguments

sigMatrix

matrix of signatures scores, NUM_SAMPLES x NUM_SIGNATURES

metaData

data.frame of meta-data for cells

autocorrelation

data.frame autocorrelation results

clusterMeta

bool whether or not to cluster meta-data (used when pool=TRUE)

Value

a list:

  • Computed: a list of clusters of computed signatures

  • Meta: a list of clusters of meta data signatures


YosefLab/VISION documentation built on June 14, 2024, 5:27 p.m.