clusterSignatures: Clusters signatures according to the rank sum
In YosefLab/VISION: Functional interpretation of single cell RNA-seq latent manifolds
View source: R/methods-Signature.R
clusterSignatures R Documentation
Clusters signatures according to the rank sum
Description
Clusters signatures according to the rank sum
Usage
clusterSignatures(sigMatrix, metaData, autocorrelation, clusterMeta)
Arguments
sigMatrix
matrix of signatures scores, NUM_SAMPLES x NUM_SIGNATURES
metaData
data.frame of meta-data for cells
autocorrelation
data.frame autocorrelation results
clusterMeta
bool whether or not to cluster meta-data (used when pool=TRUE)
Value
a list:
Computed: a list of clusters of computed signatures
Meta: a list of clusters of meta data signatures
YosefLab/VISION documentation built on Feb. 19, 2023, 9:50 p.m.
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View source: R/methods-Signature.R
| clusterSignatures | R Documentation |
Clusters signatures according to the rank sum
Description
Clusters signatures according to the rank sum
Usage
clusterSignatures(sigMatrix, metaData, autocorrelation, clusterMeta)
Arguments
sigMatrix |
matrix of signatures scores, NUM_SAMPLES x NUM_SIGNATURES |
metaData |
data.frame of meta-data for cells |
autocorrelation |
data.frame autocorrelation results |
clusterMeta |
bool whether or not to cluster meta-data (used when pool=TRUE) |
Value
a list:
Computed: a list of clusters of computed signatures
Meta: a list of clusters of meta data signatures
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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