computeKNNWeights-matrix-method: compute for each vector the weights to apply to it's K...

In YosefLab/VISION: Functional interpretation of single cell RNA-seq latent manifolds

compute for each vector the weights to apply to it's K nearest neighbors

Description

compute for each vector the weights to apply to it's K nearest neighbors

Usage

## S4 method for signature 'matrix'
computeKNNWeights(object, K = round(sqrt(nrow(object))))

Arguments

object	matrix to use for KNN
K	Number of neighbors to consider.

Value

a list of two items: indices: matrix, cells X neighbors Each row specifies indices of nearest neighbors weights: matrix, cells X neighbors Corresponding weights to nearest neighbors

YosefLab/VISION documentation built on Feb. 19, 2023, 9:50 p.m.