applyPermutationWPCA: Applies pemutation method to return the most significant...

Description Usage Arguments Details Value

View source: R/Projections.R

Description

Applies pemutation method to return the most significant components of PCA data

Usage

1
applyPermutationWPCA(expr, components = 50, p_threshold = 0.05)

Arguments

expr

Expression data

components

Maximum components to calculate. Default is 50.

p_threshold

P Value to cutoff components at. Default is .05.

Details

Based on the method proposed by Buja and Eyuboglu (1992), PCA is performed on the data then a permutation procedure is used to assess the significance of components

Value

(list):


YosefLab/VISION documentation built on Sept. 14, 2021, 5:27 p.m.