readPeakFile: readPeakFile
In YuLab-SMU/ChIPseeker: ChIPseeker for ChIP peak Annotation, Comparison, and Visualization
readPeakFile R Documentation
readPeakFile
Description
read peak file and store in data.frame or GRanges object
Usage
readPeakFile(peakfile, as = "GRanges", ...)
Arguments
peakfile
peak file
as
output format, one of GRanges or data.frame
...
additional parameter (pass to 'utils::read.delim()')
Value
peak information, in GRanges or data.frame object
Author(s)
G Yu
Examples
peakfile <- system.file("extdata", "sample_peaks.txt", package="ChIPseeker")
peak.gr <- readPeakFile(peakfile, as="GRanges")
peak.gr
YuLab-SMU/ChIPseeker documentation built on Nov. 2, 2024, 1:45 p.m.
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| readPeakFile | R Documentation |
readPeakFile
Description
read peak file and store in data.frame or GRanges object
Usage
readPeakFile(peakfile, as = "GRanges", ...)
Arguments
peakfile |
peak file |
as |
output format, one of GRanges or data.frame |
... |
additional parameter (pass to 'utils::read.delim()') |
Value
peak information, in GRanges or data.frame object
Author(s)
G Yu
Examples
peakfile <- system.file("extdata", "sample_peaks.txt", package="ChIPseeker")
peak.gr <- readPeakFile(peakfile, as="GRanges")
peak.gr
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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