DE_gene_pairwise_list: Generate gene list for each pair of comparison

Description Usage Arguments

Description

Generate gene list for each pair of comparison

Usage

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DE_gene_pairwise_list(
  markers,
  compare_list,
  logFC_col = "logFC",
  gene_col = "feature",
  logFC_thres = 0.25,
  group1 = "group",
  group2 = "compare_group"
)

Arguments

markers

data.frame generated by find_DE_genes

compare_list

a list, each element has a 2-element vector


Yutong441/TBdev documentation built on Dec. 18, 2021, 8:22 p.m.