dim_red_3D_traj: Add trajectory line to 3D scatterplot

In Yutong441/TBdev: Infer a Trophoblast Developmental Trajectory

Description

Add trajectory line to 3D scatterplot

Usage

dim_red_3D_traj(
  plot_data,
  px,
  py,
  pz,
  pcolor,
  traj_data,
  tx,
  ty,
  tz,
  tcolor,
  traj_color = "black",
  all_theta = 0,
  all_phi = 0,
  AP = NULL,
  repel_force = 1,
  further_repel = T,
  magnify_text = 1,
  label_traj_text = NULL,
  seg_color = NA,
  traj_width = 2,
  ...
)

Arguments

plot_data	the dataframe for dim red plots
px,	py, pz the column names in plot_data that corresponds to x, y and z axes
pcolor	the column name in plot_data that provide the color for points
traj_data	the dataframe for the trajectory data
tx,	ty, tz, tcolor similar to px, py, pz, pcolor
...	pass to dim_red_3D

Author(s)

Yutong Chen

References

http://htmlpreview.github.io/?https://github.com/AckerDWM/gg3D/blob/master/gg3D-vignette.html

Yutong441/TBdev documentation built on Dec. 18, 2021, 8:22 p.m.