R/zzz.R

In abruyneel/AlleleProfileR: Genome editing strategy agnostic variant identification and profiling tool

#' AlleleProfileR
#'
#' Gene editing strategies, such as zinc-finger nucleases (ZFNs), transcription activator-like effector nucleases (TALENs) and clustered regularly interspaced short palindromic repeat/Cas9 (CRISPR/Cas9), are revolutionizing biochemistry. Potent, yet flexible, bioinformatics technologies are required to aid in the profiling of the generated transgenic cell lines, plants or animals. Here, we present AlleleProfileR, a novel analysis tool, written in a combination of R and C++, with the ability to batch process the sequence analysis of large and complex experiments, including base editing and large deletions created by using two guides.
#'
#' @docType package
#' @author Arne Bruyneel <arne.bruyneel@gmail.com>
#' @import Rcpp
#' @importFrom Rcpp evalCpp
#' @useDynLib AlleleProfileR
#' @name AlleleProfileR
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